Scientific Application – PyMOL

Table of Contents

Overview

Setting up your Environment and Invoking

Links

Additional Help

Overview

PyMOL is a molecular viewer, render tool, 3D molecular editor developed in the spirit of RasMol and OpenRasMol and intended for visualization of 3D chemical structures including atomic resolution X-ray crystal structures of: proteins, nucleic acids (DNA, RNA, & tRNA), and carbohydrates, as well as small molecule structures of drug leads, inhibitors, metabolites, sugars, nucleoside phosphates, and other ligands including inorganic salts and solvent molecules.

 

Research Computing Server(s): Kure, Killdevil
Default Version: 1.7.4.3
Installed Version(s): 1.7.0.3, 1.7.4.0, 1.7.4.3

Setting up your Environment and Invoking

PyMOL can be accessed through the Research Computing servers Kure and KillDevil. Choose one of the following methods for accessing PyMOL depending on your local computer setup.

Invoking PyMOL on Research Server via UNIX/Linux Desktop

Invoking PyMOL on Research Server via Windows Desktop with X-Win32

Links

  • For more information and up-to-date documentation, check out the PyMOL Home Page.

Additional Help

Research Computing home pageĀ